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Tutorial
Prediction
Virus
Project name
DEMO
The following shows an example of how to run AIVE using the sample data (BA.5_RBM)
Target virus
select the virus that the user wants to check. If not on the list, select All Viruses
All Viruses
SARS-CoV-2
※ From the V.O.C. list, variants can only be generated for SARS-CoV-2 if 'Wuhan-Hu-1' is selected.
Prediction protein structure
Input virus Sequence
※ The length range for sequences that are covered is between 16 and 2700.
+ Add
- Del
Upload fasta file
Alignment
To generate mutations in Protein sequence, click on the corresponding location, and select one from 20 amino acids.
Unable to select alignment when selecting Demo and VOCs
Amino acids with electriccally charged side chain_negative
R
H
K
Amino acids with electriccally charged side chain_positive
D
E
Amino acids with Polar uncharged side chain
S
T
N
Q
Special cases
C
G
P
Amino acids with hydrophobic side chain
A
V
I
L
M
F
Y
W
Keep private
Select this option if you want your job hidden from the public.
Variants protein sequence
Copy Clipboard
host Sequence
Copy Clipboard
Upload fasta file
Server Prediction
R
Select codon
CGT
CGC
CGA
CGG
AGA
AGG
H
Select codon
CAT
CAC
K
Select codon
AAA
AAG
D
Select codon
GAT
GAC
E
Select codon
GAA
GAG
S
Select codon
TCT
TCC
TCA
TCG
AGT
AGC
T
Select codon
ACT
ACC
ACA
ACG
N
Select codon
AAT
AAC
Q
Select codon
CAA
CAG
C
Select codon
TGT
TGC
G
Select codon
GGT
GGC
GGA
GGG
P
Select codon
CCT
CCC
CCA
CCG
A
Select codon
GCT
GCC
GCA
GCG
V
Select codon
GTT
GTC
GTA
GTG
I
Select codon
ATT
ATC
ATA
L
Select codon
TTA
TTG
CTT
CTC
CTA
CTG
M
Select codon
ATG
F
Select codon
TTT
TTC
Y
Select codon
TAT
TAC
W
Select codon
TGG